International Journal of Pharmacological Research
ISSN: 2277-3312
www.ssjournals.com
Journal DOI:10.7439/ijpr
Bioactive Compound Evaluation of Ethanol Extract from Geodorum
densiflorum (Lam.) Schltr. by GC-MS analysis
Keerthiga M* and Anand S. P
Department of Biotechnology, National College (Autonomous & CPE), Tiruchirappalli – 01, Tamil Nadu, India
Corresponding author*
Keerthiga Manohar,
Research Scholar,
Department of Biotechnology,
National College (Autonomous & CPE), Tiruchirappalli – 01, Tamil Nadu, India
E-mail: keerthigamanohar@gmail.com
Abstract
The phytochemical constituents are responsible for medicinal value of the plant species. The present
investigation was carried out to analyze the bioactive components from the whole plant of Geodorum densiflorum (Lam.)
Schltr. using GC-MS technique. The chemical compositions of the ethanolic extract of G. densiflorum were investigated
using Perkin - Elmer Gas Chromatography – Mass Spectrometry and about twenty one bioactive phytochemical
compounds were identified. The prevailing compounds where Hexadecanoic acid, Ethyl ester (38.884 %), Ionone (7.125
%), 3-Deoxy-d-mannoic lactone (7.4441 %), 2,3-Butanediol (4.725 %) and 2-Piperidinone, N-[4-bromo-n-butyl]- (4.004
%), (E)-9-Octadeconoic acid ethyl ester (3.891 %), 1H-Pyrrole-2-Carbonitrile (3.778 %), Pyridinium, 1-amino-, chloride
(3.305 %), 4H- Pyran-4-one, 3,5-dihydroxy-2-methyl- (3.274) and having various biological activities. This was the first
report on the identification of bioactive compounds from ethanol extract of G. densiflorum.
Keywords: Phytochemical Compounds, GC-MS analysis and Geodorum densiflorum.
1. Introduction
From ancient times higher plants are best sources of bioactive compounds, play principal role in the maintenance
of human health. Literature studies represent the herbal plants are reservoir of effective chemotherapeutants, these are
more systemic, easily biodegradable and non-phytotoxic.[1]-[3] In general, secondary metabolites from plants were having
interesting biological activities. These secondary metabolites are act as lead compound for new drugs because of its variety
of structural arrangements and properties.[4] Knowledge on the phytoconstituents of plants is desirable for the discovery
of therapeutic agents, new sources of economic phytocompounds for the synthesis of complex chemical substances and for
disclosing the actual significance of folkloric remedies.[5] The standardization of the natural drugs has emerged as a new
branch of science as the phytochemicals have complementary and overlapping mechanism of action; hence a thorough
validation of the herbal drugs was emphasized and prioritized. Mass Spectrometry coupled with chromatographic
separations, Gas Chromatography (GC/MS) is normally used for direct analysis of chemical components existing in herbal
medicines. For the analysis of medicinal plants, GC-MS technique have been proved to be highly commended analysis for
non-polar components and volatile essential oil, fatty acids, lipids[6] and alkaloids[7].
Recently there has been tremendous progress in medicinal plants research; however orchids have not been
exploited fully for their medicinal application. Recent researches reported the presence of Anthocyanins, Stikbnoids,
Triterpenoids, Orchinol, Hircinol, Cyperpedinl, Jibantine, Nidemin, Lorogcossin, Gymopusin in Bulbophyllum gumpous;
alkyl perulate and β-sistosero D-glucoside in Vanda tessellate; Alkanes and Alkanol Sistosterol, Resin, Saponin, Tannins,
Fatty Acids, Colouring Agents etc.[8] Geodorum densiflorum (Lam.) Schltr. (Family: Orchidaceae) is an endangered
terrestrial orchid widely distributed in humid tropical forests of south India. Literature studies indicate that no reports on G.
densiflorum has so far been undertaken to provide enough scientific data in favour of reported traditional uses. Traditional
use varies among the local practitioners for menstrual cycle regulation, joint pain and arthritis, diabetic, applied externally
to cure Carbuncles, etc.[9] As part of the endeavor for search of therapeutic properties of G.densiflorum we herein reported
the GC-MS analysis of ethanol extract from the whole plant.
2. Materials and Methods
The plant Geodorum densiflorum (Lam.) Schltr. were collected from Periyakombai hill area of Kolli hills in
Namakkal District of Tamil Nadu, India. The botanical identity of this plant was confirmed by Dr. G. V. S. Murthy,
Scientist – F & Head of Office, Botanical Survey of India (Southern Circle), Coimbatore, Tamil Nadu. The voucher
IJPR Volume 5 Issue 6 (2015)
139
Keerthiga M and Anand S. P
Research Article
specimen was submitted at the Department of Botany, National College (Autonomous), Tiruchirappalli-620 001, Tamil
Nadu, India.
2.1 Plant Sample Extraction
The whole plant material was shaded dried and made into fine powder. 20 g powdered plant material is soaked in
50 ml of absolute ethanol overnight and then filtered through whatmann filter paper No.41 along with 2gm Sodium Sulfate
to remove the sediments and traces of water in the filtrate. Before filtering, the filter paper along with Sodium Sulfate is
wetted with ethanol the filtrate is then concentrated and reduces the volume to 1ml the extract contains both polar and nonpolar Phytocomponents.
2.2 GC-MS Analysis
GC MS analysis was carried out on a GC clarus 500 Perkin Elmer system comprising a AOC-20i auto sampler
and Gas Chromatography interfaced to a Mass Spectrometer (GC-MS) instrument employing the following conditions:
column RTX 5Ms (Column diameter is 0..32mm, column length is 30 m and column thickness 0.50 μm), operating in
electron impact mode at 70eV; Helium gas (99.999%) was used as carrier gas at a constant flow of 1.73 ml /min and an
injection volume of 0.5 μl was employed (split ratio of 10:1) injector temperature 270 ºC; ion-source temperature 200 ºC.
The oven temperature was programmed from 40 ºC (isothermal for 2 min), with an increase of 8ºC/min, to 150 ºC, then 8
ºC/min to 250 ºC, ending with a 20 minutes isothermal at 280 ºC. Mass spectra were taken at 70eV; a scan interval of 0.5
seconds and fragments from 40 to 450 Da. Total GC running time is 26 minutes. The relative percentage amount of each
component was calculated by comparing its average peak area to the total areas. Software adopted to handle mass spectra
and chromatograms was a Turbo Mass Ver 5.2.0 [10].
2.3 Identification of components
Interpretation on GCMS was conducted using the database of National Institute Standard and Technology (NIST)
having more than 62,000 patterns. The spectrum of the unknown component was compared with the spectrum of the
known components stored in the NIST library. The name, molecular weight and structure of the components of the test
materials were ascertained (Dr. Duke’s. Phytochemical and Ethnobotanical Databases).
3. Results
Twenty one compounds were identified in ethanol extract of G. densiflorum by GC-MS analysis. The bioactive
compounds with their Retention Time (RT), Molecular structure, Molecular Formula, Molecular Weight, Concentration
(peak area %), nature of compounds and biological activity are presented in (Table 1 & 2 and Fig 1). The prevailing
compounds where Hexadecanoic acid, ethyl ester (38.884 %), Ionone (7.125 %), 3-Deoxy-d-mannoic lactone (7.4441 %),
2,3-Butanediol (4.725 %) and 2-Piperidinone, N-[4-bromo-n-butyl]- (4.004 %), (E)-9-Octadeconoic acid ethyl ester (3.891
%), 1H-Pyrrole-2-Carbonitrile (3.778 %), Pyridinium, 1-amino-, chloride (3.305 %), 4H- Pyran-4-one, 3,5-dihydroxy-2methyl- (3.274), Undecanal, 2-methyl- (2.128 %), 5-Hydroxymethylfurfural (2.005 %), Propanoic acid, 2-hydroxyl-, 2methylpropyl ester (1.628 %) and p-Ethoxybenzyl alcohol (1.457 %). The presence of various bioactive compounds
justifies the use of the whole plant for various ailments by traditional practitioners. However isolation of individual
phytochemical constituents and subjecting to biological activity will definitely give fruitful results.
Fig-1: Chromatogram obtained from GC-MS with the ethanolic extract of G.densiflorum (Lam.) Schltr.
IJPR Volume 5 Issue 6 (2015)
140
Keerthiga M and Anand S. P
Research Article
Table 1: Components detected in ethanolic extract of G.densiflorum (Lam.) Schltr.
Molecular
Formula
Molecular
Weight
Peak
Area
%
5-Dodecanol
C12H26O
186.334
0.132
4.061
1-Pentanol
C5H12O
88.15
0.437
3
7.154
Guanidine
CH5N3
59.07
0.261
4
8.532
D-Mannitol, 1-o-heptyl
C13H28O6
280.357
0.275
5
9.440
2,5-Dimethyl-5-ethyl-2oxazoline
C7H13NO
127.184
0.346
6
10.705
2-Piperidinone, N-[4bromo-n-butyl]-
C9H16BrNO
234.136
4.004
7
12.416
1,2-Cyclopentanediol, 3methyl-
C6H12O2
116.158
0.305
8
12.726
Ionone
C13H20O
192.30
7.125
9
14.126
Propanoic acid, 2hydroxy-, 2-methylpropyl
ester
C7H14O3
146.184
1.628
10
14.791
2,3-Butanediol
C4H10O2
90.121
4.725
11
15.239
Pyrimidine-4,6(3H, 5H)dione, 2-buttylthio-
C8H12N2O2S
200.258
0.401
12
16.236
Undecanal, 2-methyl-
C12H24O
184.318
2.128
13
17.450
1,3-Dioxolane, 2pentadecyl-
C18H36O2
284.477
0.553
14
19.030
1H-pyrrole-2-Carbonitrile
C5H4N2
92.1
3.778
15
20.189
Pyridinium, 1-amino-,
chloride
C5H7N2.Cl
138
3.305
16
20.656
Hexadecanoic acid, ethyl
ester
C18H36O2
284.477
38.884
S.
No
RT
Compound Name
1
4.020
2
IJPR Volume 5 Issue 6 (2015)
Molecular Structure
141
Keerthiga M and Anand S. P
Research Article
17
21.494
4H-Pyran-4-one, 3,5dihydroxy-2-methyl-
C6H6O4
142.109
3.274
18
21.853
3-Deoxy-d-mannoic
lactone
C6H10O5
162.140
7.444
19
22.821
(E)-9-Octadeconoic acid
ethyl ester
C20H38O2
310.514
3.891
20
23.933
5-Hydroxymethylfurfural
C6H6O3
126.11
2.005
21
25.371
P- Ethoxybenzyl alcohol
C9H12O2
152.190
1.457
Table 2: GC-MS analysis showed phytochemical compounds, their nature and their biological activities of ethanol
extract of G. densiflorum.
S.
No
Compound Name
Nature of
Compound
Biological Activity
1
2
5-Dodecanol
1-Pentanol
Fatty alcohol
Alcohol
3
Guanidine
Nitrogenous
Compound
4
d-mannitol, 1-o-heptyl
2,5-Dimethyl-5-ethyl-2oxazoline
2-Piperidinone, N-[4-bromon-butyl]1,2-Cyclopentanediol, 3methyl-
Sugar alcohol
Heterocyclic
Compound
Alcoholic
Compound
Antimicrobial
[16]
Ionone
Monoterpenes
Antibacterial, Sedative, Antitumor, Cytotoxic, Antiinflammatory, Insecticidal and Molluscidal activity
[17]
Alkene Compound
Anticancer activity
[18]
Volatile Compound
[19]
5
6
7
8
9
10
Propanoic acid, 2-hydroxy-,
2-methylpropyl ester
2,3-Butanediol
Alkaloid
Flavour
Antimicrobial
Anticancer, Antidiabetic, Antiviral, Antiinflammatory,Antibiotic,Antileishmenial,
Antiprotozoal, Antihistaminic and Antihypertensive
Osmotic diuretic agent, Renal vasodilator
Antibacterial, Anti-inflammatory, Anti-tumour and
Antioxidant
Antimicrobial, Antioxidant,
Anti-inflammatory
References
[11]
[11]
[12]
[13]
[14]
[15]
11
Pyrimidine-4,6(3H, 5H)dione, 2-buttylthio-
Heterocyclic
Compound
12
13
Undecanal, 2-methyl1,3-Dioxolane, 2-pentadecyl-
14
1H-pyrrole-2-Carbonitrile
Aldehydes
Aromatic Compound
Heterocyclic
aromatic Compound
Pesticides
Hypoglycemic, Antimalarial, Analegesic, Antiinflammatory, PDE4 inhibitor and Spasmolytic
activity
Pesticides, Flavors and Fragrances
Antibacterial and Antifungal activity
Hypolipidemic, Antimicrobial, Anti-inflammatory and
Antitumor activity
15
Pyridinium, 1-amino-,
chloride
Nitrogen Compound
Antimicrobial and Anti-inflammatory activity
[24]
16
Hexadecanoic acid, ethyl ester
Palmitic acid ester
Antioxidant, Hypocholesterolemic, Nematicide,
Pesticide, Lubricant, Anliandrogenic, Flavor,
Hemolytic, 5 Alpha reductase inhibitor
[25]
Flavonoid Fraction
Antimicrobial, Anti-inflammatory and Antioxidant
Cyclic ester
Antimicrobial activity
Anti-inflammatory, Anticancer, hypocholesterolemic,
5-Alpha reductase inhibitor and antiandrogenic
activity
Antioxidant, Antiproliferative activity
Antimalarial
17
18
4H-Pyran-4-one, 3,5dihydroxy-2-methyl3-Deoxy-d-mannoic lactone
19
(E)-9-Octadeconoic acid ethyl
ester
Oleic acid ester
20
21
5-Hydroxymethylfurfural
P- Ethoxybenzyl alcohol
Sugar Compound
Alcoholic Compound
IJPR Volume 5 Issue 6 (2015)
[20]
[21]
[22]
[23]
[16]
[26]
[27]
[28]
[29]
142
Keerthiga M and Anand S. P
Research Article
3. Discussion
The identified compounds with more percentage like Hexadecanoic acid, ethyl ester (Palmitic acid ester) (38.884
%), Ionone (Monoterpenes) (7.125 %), 3-Deoxy-d-mannoic lactone (Cyclic ester) (7.4441 %), 2,3-Butanediol (Volatile
Compound) (4.725 %) and 2-Piperidinone, N-[4-bromo-n-butyl]- (Alkaloid) (4.004 %),showed a wide range of potent
bioactivity. Among the twenty one identified compounds 10 showed Anti-microbial activity, 9 showed Anti-inflammatory,
6 showed Anti-cancer and 4 showed anti-oxidant and also showed activities such as hypocholesterolemic, antiandrogenic,
Anliandrogenic, antiproliferative, Hemolytic, 5 Alpha reductase inhibitor, Hypolipidemic, Antimalarial, Nematicide,
Pesticide, Insecticidal and Molluscidal activity and also having compounds for Lubricant and Flavor. Unsaturated fatty
acids are important to every cell for normal growth, to support the lubricating quality of skin [30] and to lower cholesterol
levels of the blood.[31] Pure isolated plant alkaloids are used as basic medicinal agent for analgesic, anti-spasmodic, antibacterial properties, etc. For example Quinine (alkaloid) extracted from Cinchona is used to treat malaria.[32] The
previous study on G. densiflorum showed antibacterial, antioxidant, cytotoxic, thrombolytic, sedative, analgesic and
anxiolytic activities.[33] The presences of these phytocompound are responsible for the properties of plant.
4. Conclusion
The GC-MS studies carried out on ethanol extract of Geodorum densiflorum (Lam.) Schltr. showed the presence
of bioactive compounds responsible for potent activity of medicinal orchid. Further work regarding specific activity of the
identified compound will provide more insight about the role of plant.
References
[1] Vyas GD. Soil Fertility Deterioration in Crop Land Due to Pesticide. Journal of Indian Botanical Society, 1999; 78:
177-78.
[2] Kaushik JC, Arya Sanjay, Tripathi NN, Arya S. Antifungal properties of some plant extracts against the damping off
fungi of forest nurseries. Indian Journal of Forestry, 2002; 25: 359-361.
[3] Chaman Lal and Verma LR. Use of certain bio-products for insect-pest control. Indian Journal of Traditional
Knowledge, 2006; 5(1): 79- 82.
[4] de-Fatima A, Modolo LV, Conegero LS, Pilli RA, Ferreira CV, Kohn LK, de-Carvalho JE. Lactones and their
derivatives: biological activities, mechanisms of action and potential leads for drug design. Curr. Med. Chem. 2006;
13: 3371-84.
[5] Milne A. Inhalational and local anesthetics reduce tactile and thermal responses in Mimosa pudica Linn. Masui, 1993;
1190-3.
[6] Jie MSF and Choi CYC. J. Int. Fed. Clin. Chem 1991; 3: 122.
[7] Betz JM, Gay ML, Mossoba MM, Adams S and Portz BS. Chiral gas chromatographic determination of ephedrinetype alkaloids in dietary supplements containing Má Huáng. J AOAC Int 1997; 80: 303.
[8] Kumar S, Subramoniam A and Pushpangadan P. Aphrodisiac activity of Vanda tesellata extract in mice. Indian
Journal of Pharmacol. 2000; 32: 300-04.
[9] Keerthiga M and Anand SP. Physicochemical, Preliminary Phytochemical Analysis and Antibacterial Activity against
Clinical Pathogens of Medicinally Important Orchid Geodorum densiflorum (Lam) Schltr. International Journal of
Pharmacy and Pharmaceutical Sciences 2014; 6(8): 558-61.
[10] Srinivasan R, Natarajan D and Shivakumar M S. Antimicrobial and GC-MS Analysis of Memecylon edule Leaf
Extracts. International Journal of Current Pharmaceutical Review and Research, 2014; 5(1): 1-13
[11] Dr. Duke's Phytochemical and Ethnobotanical Databases. http://www.ars-grin.gov/duke/chem-activities.html
[12] Muhammad Said, Amin Badshah, Naseer Ali Shah, Hizbullah Khan, Ghulam Murtaza, Boris Vabre, Davit Zargarian
and Muhammad Rashid Khan. Antitumor, Antioxidant and Antimicrobial Studies of Substituted Pyridylguanidines.
Molecules, 2013; 18: 10378-96.
[13] Ramalakshmi S and Muthuchelian K. Analysis of Bioactive Constituents from the Leaves of Mallotus tetracoccus
(Roxb.) Kurz, by Gas Chromatography - Mass Spectrometry. International Journal of Pharmaceutical Science and
Research. 2011; 2(6): 1449-54.
[14] Shivani Bansal and Halve AK. Oxazolines: Their Synthesis and Biological Activity. IJPSR, 2014; 5(11): 4601-16.
[15] Meenakshi VK, Gomathy S, Senthamarai S, Paripooranaselvi M and Chamundeswari KP. GC-MS Determination of
the Bioactive Components of Microcosmus exasperatus Heller, 1878. J. Curr. Chem. Pharm. Sc., 2012; 2(4): 271-76.
[16] Jananie RK, Priya V, Vijayalakshmi K. Determination of Bioactive Components of Cynodon dactylon by GC-MS
Analysis. New York Science Journal, 2011; 4 (4): 16-20
IJPR Volume 5 Issue 6 (2015)
143
Keerthiga M and Anand S. P
Research Article
[17] Zhang H, Qiu M, Chen J, Sun Y, Wang C, Fong HHS. Plant terpenes, in Phytochemistry and Pharmacognosy section,
Chemical Sciences, Engineering and Technology Resources, Encyclopedia of Life Support Systems (EOLSS),
Developed under the Auspices of the UNESCO, EOLSS Publishers, Oxford, UK, 2011. (http://www.eolss.net).
[18] Paul John Peter M, Yesu Raj J, Prabhu Sicis VP, Joy V, Saravanan J and Sakthivel S. GC-MS Analysis of bioactive
components on the Leaves extract of Stylosanthes fruticosa- A potential folklore medicinal plant. Asian Journal of
Plant Science and Research, 2012; 2 (3): 243-53. ord.web.ym.edu.tw/ezcatfiles/b024/img/img/31/916643624.xls
[19] Choong-Min Ryu, Mohamed A. Farag, Chia-Hui Hu, Munagala S. Reddy, Han-Xun Wei, Paul W. Paré, and Joseph
W. Kloepper. Bacterial volatiles promote growth in Arabidopsis. Proc. Natl. Acad. Sci. USA, 2003; 100: 4927– 32.
[20] Yuriy M. Kononevich, Ludmila S. Bobkova, Alexander S. Smolski, Anatoly M. Demchenko. Synthesis and
Antioxidant Activity of 7-Thio Derivatives of 6,7-Dihydro-1H-cyclopenta[d]pyrimidine-2,4(3H,5H)-dione. Sci
Pharm. 2015; 83: 41–48.
[21] Sujatha, Karthika, Sivakamasundari, Mariajancyrani and Chandramohan. GC-MS Analysis of Phytocomponents and
Total Antioxidant Activity of Hexane Extract of Sinapis alba. IJPCBS, 2014; 4(1): 112-17.
[22] Hatice Baspınar Küçük, Ayse Yusufoglu, Emel Matarac and Sibel Dösler. Synthesis and Biological Activity of New
1,3-Dioxolanes as Potential Antibacterial and Antifungal Compounds. Molecules, 2011. 16: 6806-15
[23] Dharmesh R. Dhameliya and Mukesh C. Patel. Synthesis, Characterization and Biological Activity of Novel Pyrrole
Compounds. Rasayan J Chem. 2011; 4(3): 580-84.
[24] Vildan Alptüzün, Sülünay Parlar, Hüseyin Taşl and Ercin Erciyas. Synthesis and Antimicrobial Activity of Some
Pyridinium Salts. Molecules, 2009; 14: 5203-15.
[25] Farina Mujeeb, Preeti Bajpai and Neelam Pathak. Phytochemical Evaluation, Antimicrobial Activity, and
Determination of Bioactive Components from Leaves of Aegle marmelos. BioMed Research International. 2014; 1-11
[26] Shobana S, Vidhya VG, Ramya M. Antibacterial activity of garlic varieties (Ophioscordon and Sativum) on enteric
pathogens. Curr Res J Biol Sci. 2009; 1: 123–6.
[27] Manonmani R and Catharin Sara S. GC-MS Analysis of Bioactive Components of an Important Medicinal Fern
Actiniopteris radiata (Swartz) Link. World Journal of Pharmaceutical Research, 2015; 4(4): 1860-69.
[28] Zhao.L, Chen J., Su J., Li L., Hu S., Li B., Zhang X., Xu Z and Chen T. In vitro antioxidant and antiproliferative
activities of 5-hydroxymethylfurfural. J. Agric. Food Chem. 2013; 61(44): 10604-11.
[29] Wright AD, Kong GM, Angerhofer CK, Greenidqe P, Linden A and Desqueyroux-Faundez R. Antimalarial activity:
the search for marine-derived natural products with selective antimalarial activity. J. Nat. Prod. 1996; 59(7): 710-16.
[30] Okwu, D. E., & Morah, F. N. I. The potentials of Garcinia kola seed as source for nutraceuticals. J. Med. Arom. Plant
Sci, 2006; 28, 605-11.
[31] Igwe, O. U., & Okwu, D. E. GC-MS evaluation of bioactive compounds and antibacterial activity of the oil fraction
from the seeds of Brachystegia eurycoma (HARMS). Asian Journal of Plant Science and Research, 2013; 3(2), 47-54.
[32] Esimone, C. O., Nworu, C. S., Ekong, U. S., & Okereke, B. Evaluation of the antiseptic properties of Cassia alatabased herbal soap. Internet J Altern Med, 2008; 6(1): 1-8.
[33] Keerthiga M and Anand SP. A review on Ethnomedicinal, Phytochemical and Pharmacological studies of Geodorum
densiflorum (Lam.) Schltr. - an endangered orchid. Journal of Research in Biology, 2014; 4(8):1543-48.
IJPR Volume 5 Issue 6 (2015)
144